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ABS database v 1.0
 
 

 

ENTRY: A0028
Actin, alpha-cardiac

REFSEQ

-NM_005159 (human)
-NM_009608 (mouse)

PUBMED

- W.W. Wasserman and J.W. Fickett.
"Identification of regulatory regions which confer muscle-specific gene expression."
Journal of Molecular Biology 278:167-81. (1998)
[PMID: 9571041]


PROMOTER ANNOTATION

OrganismGenBank AccessionPromoter
Homo sapiensM13483[500 bps]
SitePositionSequence
SRF301CCTTACATGG
SRF352CCATGAATGG
SRF392CCAAATAAGG
SP1418GCCCCCCAC
MYOD445CAACTG
TBP469CTATAAA

Mus musculusM26773[500 bps]
SitePositionSequence
SRF300CCTTACATGG
SRF351CCATGAATGG
SRF391CCAAATAAGG
SP1419GCCCCCCAC
MYOD446CAACTG
TBP470CTATAAA


PREDICTIONS

JASPAR 0.85 0.70 0.85 0.70
PROMO 0.85 0.70 0.85 0.70
TRANSFAC 0.85 0.70 0.85 0.70


DOTPLOT



ALIGNMENTS INFORMATION

GLOBAL alignment
LOCAL alignment
AVID alignment
LAGAN alignment

 
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