Gene Prediction and Identification

Enrique Blanco

Centre de Regulació Genòmica, Barcelona (Spain)
Universitat Politècnica de Catalunya, Barcelona (Spain)

Curso de Bioinformatica de la Escuela Complutense de Verano, Madrid (2004)

With contributions from: Josep Francesc Abril, Sergi Castellano, Robert Castelo, Genis Parra and Roderic Guigo

1. Presentation of the course

2. The genefinding problem

3. Learning to use a genome browser

4. Searching motifs with weight matrices

5. Finding coding regions in DNA sequences with PERL

6. Annotation of the human sequence HS307871

7. Downloading a gene prediction program

8. Comparative gene prediction

9. Closing remarks



Enrique Blanco Garcia © 2004
eblanco@imim.es